The meaning of the score in the document 'toy_data/ppi.txt' #7

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opened 2025-10-14 17:38:01 -06:00 by navan · 0 comments
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Originally created by @ke-ning on 3/20/2024

Thank the authors for the excellent work.
I would like to ask, when training a PPI model and importing the 'ppi.txt' file from the 'toy_data' folder, each line in this file contains a score. If I want to use my own dataset to replace this ppi.txt file, how can I obtain scores for my pairs of amino acid sequences? Or could I directly import pairs of amino acids without the score for model training? Thank you.
Uploading 2024-03-20 18.39.03.png…

*Originally created by @ke-ning on 3/20/2024* Thank the authors for the excellent work. I would like to ask, when training a PPI model and importing the 'ppi.txt' file from the 'toy_data' folder, each line in this file contains a score. If I want to use my own dataset to replace this ppi.txt file, how can I obtain scores for my pairs of amino acid sequences? Or could I directly import pairs of amino acids without the score for model training? Thank you. ![Uploading 2024-03-20 18.39.03.png…]()
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Reference: github/DeepPurpose#7
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